Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1044838 bp
Thymine Count
1043475 bp
Guanine Count
933395 bp
Cytosine Count
947542 bp
Genome Length
3969379 bp
Protein-coding Genes
3570 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent oxidoreductase | D2924_01325 | Not Available | Positive | 260588 - 261115 | 18411.7 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | D2924_01330 | Not Available | Negative | 261193 - 263217 | 74756.1 |
| beta-ketoacyl-acp synthase i | D2924_01335 | Not Available | Positive | 263335 - 264546 | 42572.7 |
| 4-phosphoerythronate dehydrogenase | D2924_01340 | Not Available | Positive | 264732 - 265895 | 42602.6 |
| aspartate-semialdehyde dehydrogenase 2 | D2924_01345 | Not Available | Positive | 265879 - 266892 | 37377.3 |
| transcriptional repressor | D2924_01350 | Not Available | Negative | 266974 - 267426 | 16913.1 |
| duf4442 domain-containing protein | D2924_01355 | Not Available | Positive | 267792 - 268292 | 19442.4 |
| lysr family transcriptional regulator | D2924_01360 | Not Available | Negative | 268296 - 269174 | 33657.5 |
| type i secretion c-terminal target domain-containing protein | D2924_01365 | Not Available | Positive | 269182 - 277215 | 281530.0 |
| ggdef domain-containing protein | D2924_01370 | Not Available | Positive | 277346 - 278326 | 37605.8 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





