Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1044838 bp
Thymine Count
1043475 bp
Guanine Count
933395 bp
Cytosine Count
947542 bp
Genome Length
3969379 bp
Protein-coding Genes
3570 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system paar protein | D2924_14140 | Not Available | Positive | 3052021 - 3052305 | 9212.88 |
| sel1 repeat family protein | D2924_14145 | Not Available | Positive | 3052289 - 3053293 | 38604.7 |
| type vi secretion system contractile sheath small subunit | D2924_14150 | Not Available | Positive | 3053726 - 3054232 | 18490.1 |
| type vi secretion system contractile sheath large subunit | D2924_14155 | Not Available | Positive | 3054273 - 3055751 | 55614.1 |
| type vi secretion system baseplate subunit tsse | D2924_14160 | Not Available | Positive | 3055754 - 3056191 | 16435.7 |
| type vi secretion system baseplate subunit tssf | D2924_14165 | Not Available | Positive | 3056197 - 3057966 | 67152.2 |
| type vi secretion system baseplate subunit tssg | D2924_14170 | Not Available | Positive | 3057930 - 3058946 | 38341.0 |
| type vi secretion system-associated fha domain protein tagh | D2924_14175 | Not Available | Positive | 3058949 - 3060436 | 54968.4 |
| type vi secretion system lipoprotein tssj | D2924_14180 | Not Available | Positive | 3060439 - 3060915 | 18334.8 |
| type vi secretion system baseplate subunit tssk | D2924_14185 | Not Available | Positive | 3060922 - 3062256 | 50379.8 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





