Vibrio cholerae str. VcCHNf3

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VcCHNf3 is a Gram-negative, rod-shaped bacterium that exists predominantly as single cells. This strain exhibits heterotrophic growth, indicating its reliance on organic compounds as a source of energy. VcCHNf3 is classified as a facultative anaerobe, which allows it to thrive in both aerobic and anaerobic environments. Its optimal growth temperature is around 20.0 °C, suggesting a preference for cooler habitats. The strain's ability to inhabit multiple environments highlights its ecological versatility and potential adaptability to varying conditions. This trait may reflect the broader adaptability of Vibrio cholerae as a genus, which is known to inhabit diverse aquatic environments, including both freshwater and marine ecosystems. Understanding the ecological niche of VcCHNf3 could provide insights into its survival strategies and interactions within its habitats. Further investigations into its metabolic capabilities and environmental interactions may yield important information regarding its role in microbial communities and potential responses to environmental stressors.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainVcCHNf3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae str. VcCHNf3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Mollusca, Mammalia
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio cholerae strain VcCHNf3 Scaffold140, whole genome shotgun

Gene Summary

Adenine Count

1044838 bp

Thymine Count

1043475 bp

Guanine Count

933395 bp

Cytosine Count

947542 bp

Genome Length

3969379 bp

Protein-coding Genes

3570 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
extracellular solute-binding proteinD2924_13085Not AvailableNegative2810593 - 281167240916.8
prephenate dehydrataseD2924_13090Not AvailableNegative2811815 - 281299044147.1
ribosome-associated translation inhibitor raiaD2924_13095Not AvailableNegative2813230 - 281355612362.8
outer membrane protein assembly factor bamdD2924_13100Not AvailableNegative2813958 - 281468327877.2
23s rrna pseudouridine(1911/1915/1917) synthase rludD2924_13105Not AvailablePositive2814838 - 281581236754.4
peptidoglycan editing factor pgefD2924_13110Not AvailablePositive2815815 - 281653726145.1
atp-dependent chaperone clpbD2924_13115Not AvailablePositive2816662 - 281923595776.5
peptidase m66D2924_13120Not AvailablePositive2819525 - 282077546860.2
monovalent cation/h(+) antiporter subunit gD2924_13125Not AvailableNegative2820813 - 282112411044.2
cation:proton antiporterD2924_13130Not AvailableNegative2821124 - 282143511226.2

Displaying genes 2581 – 2590 of 3693 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CholeraCausesPMC10103850
Ear infectionsCausesPMC10103850
Wound infectionsCausesPMC10103850
SepticaemiaCausesPMC10103850
Gastrointestinal infectionsCausesPMC10103850
Necrotizing fasciitisCausesPMC10103850
VibriosisCausesPMC10472736
PneumoniaCausesPMC12801787
GastroenteritisCausesPMC12801787
SinusitisCausesPMC12801787

Displaying health effects 1 – 10 of 38 in total