Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1044838 bp
Thymine Count
1043475 bp
Guanine Count
933395 bp
Cytosine Count
947542 bp
Genome Length
3969379 bp
Protein-coding Genes
3570 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional riboflavin kinase/fad synthetase | D2924_12985 | Not Available | Positive | 2786483 - 2787451 | 35702.2 |
| isoleucine--trna ligase | D2924_12990 | Not Available | Positive | 2787482 - 2790331 | 105446.0 |
| lipoprotein signal peptidase | D2924_12995 | Not Available | Positive | 2790347 - 2790862 | 19420.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | D2924_13000 | Not Available | Positive | 2791025 - 2791459 | 15314.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | D2924_13005 | Not Available | Positive | 2791506 - 2792456 | 35213.1 |
| carbon starvation protein a | D2924_13010 | Not Available | Negative | 2792582 - 2794066 | 53123.1 |
| duf2799 domain-containing protein | D2924_13015 | Not Available | Positive | 2794319 - 2794660 | 12969.2 |
| n-acetylmuramic acid 6-phosphate etherase | D2924_13020 | Not Available | Negative | 2794703 - 2795626 | 32748.3 |
| anhydro-n-acetylmuramic acid kinase | D2924_13025 | Not Available | Negative | 2795644 - 2796756 | 40181.2 |
| beta-n-acetylhexosaminidase | D2924_13030 | Not Available | Positive | 2796862 - 2797854 | 36494.8 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





