Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1044838 bp
Thymine Count
1043475 bp
Guanine Count
933395 bp
Cytosine Count
947542 bp
Genome Length
3969379 bp
Protein-coding Genes
3570 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 3 | D2924_12885 | Not Available | Positive | 2762687 - 2764276 | 59475.2 |
| atp-dependent rna helicase srmb | D2924_12890 | Not Available | Negative | 2764382 - 2765653 | 47599.8 |
| trna1(val) (adenine(37)-n6)-methyltransferase | D2924_12895 | Not Available | Negative | 2765741 - 2766463 | 27023.5 |
| branched-chain amino acid transport system ii carrier protein | D2924_12900 | Not Available | Positive | 2766772 - 2768085 | 46191.8 |
| peptide chain release factor 2 | D2924_12905 | Not Available | Positive | 2768255 - 2769353 | 41200.9 |
| lysine--trna ligase | D2924_12910 | Not Available | Positive | 2769384 - 2770916 | 58096.4 |
| sigma-54-dependent fis family transcriptional regulator | D2924_12915 | Not Available | Positive | 2771190 - 2772524 | 49746.0 |
| hypothetical protein | D2924_12920 | Not Available | Positive | 2773102 - 2773353 | 9841.19 |
| nadp(h)-dependent aldo-keto reductase | D2924_12925 | Not Available | Negative | 2773391 - 2774449 | 39551.4 |
| dna mismatch repair protein muth | D2924_12930 | Not Available | Negative | 2774642 - 2775307 | 24615.7 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





