Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1044838 bp
Thymine Count
1043475 bp
Guanine Count
933395 bp
Cytosine Count
947542 bp
Genome Length
3969379 bp
Protein-coding Genes
3570 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | D2924_09005 | Not Available | Negative | 1993923 - 1995278 | 49433.3 |
| hypothetical protein | D2924_09010 | Not Available | Positive | 1995267 - 1995530 | 9678.81 |
| class 1 fructose-bisphosphatase | D2924_09015 | Not Available | Positive | 1995584 - 1996594 | 37343.4 |
| inorganic pyrophosphatase | D2924_09020 | Not Available | Positive | 1996764 - 1997294 | 19601.3 |
| gamma-glutamylcyclotransferase | D2924_09025 | Not Available | Negative | 1997354 - 1997701 | 13387.6 |
| translocation/assembly module tamb | D2924_09030 | Not Available | Negative | 1997712 - 2001476 | 136462.0 |
| outer membrane protein assembly factor | D2924_09035 | Not Available | Negative | 2001473 - 2003221 | 65658.1 |
| peptide-methionine (s)-s-oxide reductase | D2924_09040 | Not Available | Positive | 2003367 - 2004005 | 23361.4 |
| ytfj family protein | D2924_09045 | Not Available | Positive | 2004087 - 2004638 | 19829.8 |
| duf2607 domain-containing protein | D2924_09050 | Not Available | Positive | 2004856 - 2005161 | 11467.0 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





