Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1044838 bp
Thymine Count
1043475 bp
Guanine Count
933395 bp
Cytosine Count
947542 bp
Genome Length
3969379 bp
Protein-coding Genes
3570 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D2924_08750 | Not Available | Positive | 1943697 - 1944137 | 16486.2 |
| s-type pyocin domain-containing protein | D2924_08755 | Not Available | Positive | 1944347 - 1946848 | 91540.4 |
| bacteriocin immunity protein | D2924_08760 | Not Available | Positive | 1946851 - 1947105 | 9816.38 |
| dead/deah box helicase | D2924_08770 | Not Available | Positive | 1947725 - 1950046 | 87847.8 |
| hd-gyp domain-containing protein | D2924_08775 | Not Available | Negative | 1950355 - 1951608 | 47325.2 |
| Trna-leu | Not Available | Not Available | Positive | 1951767 - 1951851 | Not Available |
| rdd family protein | D2924_08785 | Not Available | Positive | 1952033 - 1952515 | 17872.1 |
| lps export abc transporter permease lptg | D2924_08790 | Not Available | Negative | 1952622 - 1953692 | 39199.6 |
| lps export abc transporter permease lptf | D2924_08795 | Not Available | Negative | 1953696 - 1954796 | 40937.4 |
| cytosol aminopeptidase | D2924_08800 | Not Available | Positive | 1954990 - 1956501 | 54621.0 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





