Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1044838 bp
Thymine Count
1043475 bp
Guanine Count
933395 bp
Cytosine Count
947542 bp
Genome Length
3969379 bp
Protein-coding Genes
3570 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | D2924_08490 | Not Available | Positive | 1882035 - 1883156 | 42082.8 |
| cytoskeleton protein rodz | D2924_08495 | Not Available | Positive | 1883479 - 1884561 | 38722.5 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | D2924_08500 | Not Available | Positive | 1884566 - 1885696 | 40865.3 |
| histidine--trna ligase | D2924_08505 | Not Available | Positive | 1885722 - 1886990 | 46931.5 |
| hypothetical protein | D2924_08510 | Not Available | Positive | 1887027 - 1887641 | 22323.2 |
| outer membrane protein assembly factor bamb | D2924_08515 | Not Available | Positive | 1887654 - 1888814 | 41275.0 |
| ribosome biogenesis gtpase der | D2924_08520 | Not Available | Positive | 1889007 - 1890491 | 55595.7 |
| alanyl-trna editing protein | D2924_08525 | Not Available | Positive | 1890512 - 1891429 | 34037.1 |
| dna ligase | D2924_08530 | Not Available | Positive | 1891734 - 1891967 | 8621.13 |
| exodeoxyribonuclease vii large subunit | D2924_08535 | Not Available | Negative | 1891948 - 1893288 | 50517.9 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





