Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1044838 bp
Thymine Count
1043475 bp
Guanine Count
933395 bp
Cytosine Count
947542 bp
Genome Length
3969379 bp
Protein-coding Genes
3570 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bax inhibitor-1/ycca family protein | D2924_08130 | Not Available | Negative | 1800244 - 1800915 | 23914.0 |
| amino acid abc transporter atp-binding protein | D2924_08135 | Not Available | Negative | 1801160 - 1801915 | 28879.2 |
| amino acid abc transporter permease | D2924_08140 | Not Available | Negative | 1801938 - 1803035 | 40760.7 |
| amino acid abc transporter permease | D2924_08145 | Not Available | Negative | 1803038 - 1804243 | 44020.8 |
| amino acid abc transporter substrate-binding protein | D2924_08150 | Not Available | Negative | 1804369 - 1805397 | 36852.8 |
| siroheme synthase | D2924_08155 | Not Available | Positive | 1805853 - 1806791 | 35233.3 |
| had family phosphatase | D2924_08160 | Not Available | Negative | 1806857 - 1807678 | 29781.6 |
| 7-carboxy-7-deazaguanine synthase quee | D2924_08165 | Not Available | Positive | 1807954 - 1808691 | 27362.0 |
| 7-cyano-7-deazaguanine synthase quec | D2924_08170 | Not Available | Positive | 1808704 - 1809399 | 25160.4 |
| ggdef domain-containing protein | D2924_08175 | Not Available | Negative | 1809371 - 1811374 | 76891.5 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





