Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1044838 bp
Thymine Count
1043475 bp
Guanine Count
933395 bp
Cytosine Count
947542 bp
Genome Length
3969379 bp
Protein-coding Genes
3570 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylisocitrate lyase | D2924_08030 | Not Available | Positive | 1772920 - 1773846 | 33766.7 |
| 2-methylcitrate synthase | D2924_08035 | Not Available | Positive | 1774021 - 1775154 | 41670.9 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | D2924_08040 | Not Available | Positive | 1775250 - 1777856 | 95070.7 |
| 2-methylaconitate cis-trans isomerase prpf | D2924_08045 | Not Available | Positive | 1777865 - 1779067 | 42191.4 |
| acetate--coa ligase | D2924_08050 | Not Available | Positive | 1779051 - 1780949 | 70200.1 |
| gnat family n-acetyltransferase | D2924_08055 | Not Available | Positive | 1781123 - 1781599 | 18038.4 |
| nudix domain-containing protein | D2924_08060 | Not Available | Positive | 1781680 - 1783077 | 51719.8 |
| m20/m25/m40 family metallo-hydrolase | D2924_08065 | Not Available | Negative | 1783143 - 1784249 | 39352.2 |
| 4-hydroxyphenylpyruvate dioxygenase | D2924_08070 | Not Available | Positive | 1784709 - 1785782 | 40349.0 |
| homogentisate 1,2-dioxygenase | D2924_08075 | Not Available | Positive | 1785775 - 1786911 | 43343.0 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





