Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1044838 bp
Thymine Count
1043475 bp
Guanine Count
933395 bp
Cytosine Count
947542 bp
Genome Length
3969379 bp
Protein-coding Genes
3570 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase | D2924_07615 | Not Available | Negative | 1681541 - 1682737 | 45449.3 |
| hth-type transcriptional regulator cysb | D2924_07620 | Not Available | Negative | 1682799 - 1683773 | 36174.8 |
| dna repair protein | D2924_07625 | Not Available | Positive | 1684062 - 1684826 | 28969.1 |
| trna isopentenyl-2-thiomethyl-a-37 hydroxylase miae | D2924_07630 | Not Available | Positive | 1684888 - 1685664 | 29835.0 |
| orotidine-5'-phosphate decarboxylase | D2924_07635 | Not Available | Negative | 1685722 - 1686417 | 24990.3 |
| lipopolysaccharide assembly protein lapb | D2924_07640 | Not Available | Negative | 1686490 - 1687659 | 44555.8 |
| lapa family protein | D2924_07645 | Not Available | Negative | 1687671 - 1687952 | 10112.8 |
| integration host factor subunit beta | D2924_07650 | Not Available | Negative | 1688091 - 1688369 | 10546.7 |
| 30s ribosomal protein s1 | D2924_07655 | Not Available | Negative | 1688658 - 1690328 | 61055.4 |
| (d)cmp kinase | D2924_07660 | Not Available | Negative | 1690437 - 1691114 | 24468.6 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





