Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1044838 bp
Thymine Count
1043475 bp
Guanine Count
933395 bp
Cytosine Count
947542 bp
Genome Length
3969379 bp
Protein-coding Genes
3570 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | D2924_06090 | Not Available | Negative | 1340689 - 1342227 | 55577.5 |
| penicillin-binding protein 3 | D2924_06095 | Not Available | Negative | 1342193 - 1343935 | 63353.5 |
| cell division protein ftsl | D2924_06100 | Not Available | Negative | 1343932 - 1344252 | 12174.1 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | D2924_06105 | Not Available | Negative | 1344262 - 1345212 | 35128.0 |
| dihydrolipoyl dehydrogenase | D2924_06115 | Not Available | Negative | 1345970 - 1347397 | 51012.0 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | D2924_06120 | Not Available | Negative | 1347665 - 1349569 | 66062.7 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | D2924_06125 | Not Available | Negative | 1349570 - 1352230 | 99025.9 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | D2924_06130 | Not Available | Negative | 1352280 - 1353050 | 29386.2 |
| hypothetical protein | D2924_06135 | Not Available | Negative | 1353004 - 1353192 | 7197.71 |
| single-stranded-dna-specific exonuclease recj | D2924_06140 | Not Available | Negative | 1353642 - 1355381 | 64304.2 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





