Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043997 bp
Thymine Count
1047915 bp
Guanine Count
948648 bp
Cytosine Count
934802 bp
Genome Length
3982175 bp
Protein-coding Genes
3542 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | D2923_04785 | Not Available | Negative | 1067439 - 1068152 | 25600.6 |
| atp-dependent dna helicase | D2923_04790 | Not Available | Negative | 1068149 - 1070089 | 71684.4 |
| hypothetical protein | D2923_04795 | Not Available | Positive | 1070043 - 1070480 | 16859.9 |
| hypothetical protein | D2923_04800 | Not Available | Negative | 1070518 - 1070709 | 6983.53 |
| formyltetrahydrofolate deformylase | D2923_04805 | Not Available | Positive | 1070654 - 1071487 | 31374.7 |
| nadph-dependent 2,4-dienoyl-coa reductase | D2923_04810 | Not Available | Negative | 1071561 - 1073561 | 73271.2 |
| signal peptide peptidase sppa | D2923_04815 | Not Available | Positive | 1073791 - 1075641 | 67089.2 |
| l-asparaginase 1 | D2923_04820 | Not Available | Positive | 1075758 - 1076771 | 36709.4 |
| duf1315 family protein | D2923_04825 | Not Available | Negative | 1076869 - 1077156 | 10726.7 |
| duf2989 domain-containing protein | D2923_04830 | Not Available | Positive | 1077260 - 1078084 | 31208.4 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





