Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043997 bp
Thymine Count
1047915 bp
Guanine Count
948648 bp
Cytosine Count
934802 bp
Genome Length
3982175 bp
Protein-coding Genes
3542 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | D2923_03720 | Not Available | Positive | 831394 - 833163 | 67113.1 |
| type vi secretion system baseplate subunit tssg | D2923_03725 | Not Available | Positive | 833127 - 834143 | 38311.0 |
| type vi secretion system-associated fha domain protein tagh | D2923_03730 | Not Available | Positive | 834146 - 835633 | 54918.4 |
| type vi secretion system lipoprotein tssj | D2923_03735 | Not Available | Positive | 835636 - 836112 | 18334.8 |
| type vi secretion system baseplate subunit tssk | D2923_03740 | Not Available | Positive | 836119 - 837453 | 50379.8 |
| dotu family type iv/vi secretion system protein | D2923_03745 | Not Available | Positive | 837456 - 838229 | 29695.6 |
| type vi secretion system atpase tssh | D2923_03750 | Not Available | Positive | 838255 - 840864 | 96223.1 |
| sigma-54-dependent fis family transcriptional regulator | D2923_03755 | Not Available | Positive | 840867 - 842459 | 59285.2 |
| type vi secretion system-associated protein tago | D2923_03760 | Not Available | Positive | 842429 - 843112 | 24626.3 |
| type vi secretion system protein tssa | D2923_03765 | Not Available | Positive | 843122 - 844531 | 53111.0 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





