Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043997 bp
Thymine Count
1047915 bp
Guanine Count
948648 bp
Cytosine Count
934802 bp
Genome Length
3982175 bp
Protein-coding Genes
3542 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase | D2923_00140 | Not Available | Negative | 37538 - 38413 | 32490.6 |
| type ii secretion system f family protein | D2923_00145 | Not Available | Negative | 38471 - 39697 | 45093.1 |
| type iv-a pilus assembly atpase pilb | D2923_00150 | Not Available | Negative | 39740 - 41428 | 62003.8 |
| pilin | D2923_00155 | Not Available | Negative | 41432 - 41845 | 14342.5 |
| carboxylating nicotinate-nucleotide diphosphorylase | D2923_00160 | Not Available | Negative | 42090 - 42980 | 31995.4 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | D2923_00165 | Not Available | Positive | 43278 - 43823 | 20705.8 |
| flavodoxin fldb | D2923_00170 | Not Available | Negative | 44004 - 44522 | 19394.7 |
| site-specific tyrosine recombinase xerd | D2923_00175 | Not Available | Positive | 44660 - 45568 | 34566.7 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | D2923_00180 | Not Available | Positive | 45585 - 46337 | 27380.1 |
| single-stranded-dna-specific exonuclease recj | D2923_00185 | Not Available | Positive | 46530 - 48269 | 64304.2 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





