Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043997 bp
Thymine Count
1047915 bp
Guanine Count
948648 bp
Cytosine Count
934802 bp
Genome Length
3982175 bp
Protein-coding Genes
3542 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminodeoxychorismate synthase component 1 | D2923_02835 | Not Available | Negative | 624762 - 626138 | 51306.8 |
| fumarate hydratase | D2923_02840 | Not Available | Positive | 626314 - 627831 | 54751.1 |
| hypothetical protein | D2923_02845 | Not Available | Positive | 627985 - 628170 | 6858.76 |
| ycjx family protein | D2923_02850 | Not Available | Positive | 628397 - 629770 | 51927.4 |
| tigr01620 family protein | D2923_02855 | Not Available | Positive | 629767 - 630786 | 37018.0 |
| transcriptional regulator tyrr | D2923_02860 | Not Available | Positive | 630900 - 632441 | 57758.0 |
| 30s ribosomal protein s5 alanine n-acetyltransferase | D2923_02865 | Not Available | Positive | 632441 - 633016 | 22309.7 |
| duf2947 family protein | D2923_02870 | Not Available | Positive | 633111 - 633584 | 18707.0 |
| dmt family transporter | D2923_02875 | Not Available | Negative | 633652 - 634530 | 31017.2 |
| alanine racemase | D2923_02880 | Not Available | Negative | 634651 - 635874 | 44122.9 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





