Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043997 bp
Thymine Count
1047915 bp
Guanine Count
948648 bp
Cytosine Count
934802 bp
Genome Length
3982175 bp
Protein-coding Genes
3542 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit beta | D2923_02475 | Not Available | Positive | 545503 - 547890 | 86088.5 |
| integration host factor subunit alpha | D2923_02480 | Not Available | Positive | 548329 - 548625 | 11120.4 |
| hypothetical protein | D2923_02485 | Not Available | Negative | 548609 - 548845 | 8927.96 |
| phosphoribosylglycinamide formyltransferase | D2923_02490 | Not Available | Negative | 548754 - 549533 | 29128.7 |
| hypothetical protein | D2923_02495 | Not Available | Positive | 549692 - 549901 | 8057.69 |
| thiopurine s-methyltransferase | D2923_02500 | Not Available | Positive | 550003 - 550659 | 25170.1 |
| hypothetical protein | D2923_02505 | Not Available | Negative | 550612 - 550782 | 6529.97 |
| phosphoribosylglycinamide formyltransferase 2 | D2923_02510 | Not Available | Negative | 550752 - 551933 | 42564.8 |
| aec family transporter | D2923_02515 | Not Available | Negative | 552081 - 552956 | 31700.7 |
| cytidine deaminase | D2923_02520 | Not Available | Negative | 553115 - 554002 | 31957.2 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





