Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043997 bp
Thymine Count
1047915 bp
Guanine Count
948648 bp
Cytosine Count
934802 bp
Genome Length
3982175 bp
Protein-coding Genes
3542 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf945 domain-containing protein | D2923_02170 | Not Available | Positive | 479324 - 480589 | 46024.1 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | D2923_02175 | Not Available | Positive | 480666 - 481805 | 41928.1 |
| alpha-l-glutamate ligase-like protein | D2923_02180 | Not Available | Negative | 481886 - 482875 | 35816.5 |
| gonadoliberin iii | D2923_02185 | Not Available | Negative | 482875 - 484383 | 55277.7 |
| atp-dependent zn protease | D2923_02190 | Not Available | Negative | 484392 - 485129 | 27603.8 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | D2923_02195 | Not Available | Negative | 485249 - 486220 | 37342.1 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | D2923_02200 | Not Available | Negative | 486332 - 487060 | 27342.9 |
| duf72 domain-containing protein | D2923_02205 | Not Available | Negative | 487198 - 488067 | 32995.8 |
| aspartate--trna ligase | D2923_02210 | Not Available | Positive | 488359 - 490134 | 65795.4 |
| thymidine kinase | D2923_02215 | Not Available | Positive | 490231 - 490809 | 21660.0 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





