Vibrio cholerae str. VcCHNf2

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae str. VcCHNf2 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain is a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. V. cholerae str. VcCHNf2 is heterotrophic, relying on organic compounds for energy, which underscores its adaptability in various habitats. The optimal growth temperature for this strain is around 20.0 °C, suggesting a preference for cooler environments, which may influence its ecological niches. This trait can be particularly relevant for its survival in aquatic ecosystems where temperature fluctuations are common. Given the diverse habitats that V. cholerae can inhabit, including both marine and freshwater systems, the strain's ability to adapt to varying oxygen levels and temperatures may play a crucial role in its ecological interactions and distribution. In summary, V. cholerae str. VcCHNf2 exemplifies the versatility of Vibrio species, capable of occupying multiple ecological niches while demonstrating specific physiological traits that enable its survival and proliferation under varying environmental conditions. Further research on this strain could provide insights into its ecological roles and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainVcCHNf2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae str. VcCHNf2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Mollusca, Mammalia
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio cholerae strain VcCHNf2 Scaffold149, whole genome shotgun

Gene Summary

Adenine Count

1043997 bp

Thymine Count

1047915 bp

Guanine Count

948648 bp

Cytosine Count

934802 bp

Genome Length

3982175 bp

Protein-coding Genes

3542 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron-containing alcohol dehydrogenaseD2923_02120Not AvailablePositive468031 - 46929945409.4
murr/rpir family transcriptional regulatorD2923_02125Not AvailableNegative469390 - 47024431526.9
putative pyridoxal-dependent aspartate 1-decarboxylaseD2923_02130Not AvailableNegative470552 - 47219861581.4
hypothetical proteinD2923_02135Not AvailableNegative472308 - 47281719296.8
lysine exporter lyso family proteinD2923_02140Not AvailableNegative473006 - 47391132387.3
hdod domain-containing proteinD2923_02145Not AvailableNegative473932 - 47486735027.7
tfox family dna transformation proteinD2923_02150Not AvailablePositive475209 - 47581723580.3
hypothetical proteinD2923_02155Not AvailableNegative475913 - 47646120138.6
response regulatorD2923_02160Not AvailableNegative476652 - 47719720548.6
atpaseD2923_02165Not AvailableNegative477146 - 47910174190.0

Displaying genes 451 – 460 of 3638 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CholeraCausesPMC10103850
Ear infectionsCausesPMC10103850
Wound infectionsCausesPMC10103850
SepticaemiaCausesPMC10103850
Gastrointestinal infectionsCausesPMC10103850
Necrotizing fasciitisCausesPMC10103850
VibriosisCausesPMC10472736
PneumoniaCausesPMC12801787
GastroenteritisCausesPMC12801787
SinusitisCausesPMC12801787

Displaying health effects 1 – 10 of 38 in total