Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043997 bp
Thymine Count
1047915 bp
Guanine Count
948648 bp
Cytosine Count
934802 bp
Genome Length
3982175 bp
Protein-coding Genes
3542 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | D2923_00845 | Not Available | Positive | 211438 - 212541 | 40117.5 |
| riboflavin synthase | D2923_00850 | Not Available | Positive | 212546 - 213199 | 23561.4 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | D2923_00855 | Not Available | Positive | 213240 - 214349 | 40412.6 |
| 6,7-dimethyl-8-ribityllumazine synthase | D2923_00860 | Not Available | Positive | 214614 - 215084 | 16433.8 |
| n utilization substance protein b | D2923_00865 | Not Available | Positive | 215084 - 215554 | 17676.2 |
| thiamine-phosphate kinase | D2923_00870 | Not Available | Positive | 215615 - 216619 | 36670.8 |
| phosphatidylglycerophosphatase a | D2923_00875 | Not Available | Positive | 216616 - 217134 | 19087.7 |
| duf3461 family protein | D2923_00880 | Not Available | Negative | 217175 - 217558 | 14741.0 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | D2923_00890 | Not Available | Negative | 217834 - 220479 | 102103.0 |
| type i methionyl aminopeptidase | D2923_00895 | Not Available | Negative | 220569 - 221411 | 31315.7 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





