Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043997 bp
Thymine Count
1047915 bp
Guanine Count
948648 bp
Cytosine Count
934802 bp
Genome Length
3982175 bp
Protein-coding Genes
3542 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter substrate binding subunit | D2923_10455 | Not Available | Negative | 2352339 - 2353331 | 36309.9 |
| ubix family flavin prenyltransferase | D2923_10460 | Not Available | Negative | 2353593 - 2354228 | 22704.6 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | D2923_10465 | Not Available | Negative | 2354235 - 2355590 | 49450.3 |
| hypothetical protein | D2923_10470 | Not Available | Positive | 2355579 - 2355842 | 9678.81 |
| class 1 fructose-bisphosphatase | D2923_10475 | Not Available | Positive | 2355896 - 2356906 | 37343.4 |
| inorganic pyrophosphatase | D2923_10480 | Not Available | Positive | 2357076 - 2357606 | 19601.3 |
| gamma-glutamylcyclotransferase | D2923_10485 | Not Available | Negative | 2357666 - 2358013 | 13387.6 |
| translocation/assembly module tamb | D2923_10490 | Not Available | Negative | 2358024 - 2361788 | 136449.0 |
| outer membrane protein assembly factor | D2923_10495 | Not Available | Negative | 2361785 - 2363533 | 65648.1 |
| peptide-methionine (s)-s-oxide reductase msra | D2923_10500 | Not Available | Positive | 2363679 - 2364317 | 23345.4 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





