Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043997 bp
Thymine Count
1047915 bp
Guanine Count
948648 bp
Cytosine Count
934802 bp
Genome Length
3982175 bp
Protein-coding Genes
3542 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-ribosylhomocysteine lyase | D2923_08715 | Not Available | Positive | 1967514 - 1968032 | 19082.1 |
| hlyc/corc family transporter | D2923_08720 | Not Available | Negative | 1968102 - 1969382 | 47410.6 |
| inner membrane protein ypjd | D2923_08725 | Not Available | Negative | 1969465 - 1970259 | 29222.8 |
| signal recognition particle protein | D2923_08730 | Not Available | Positive | 1970472 - 1971857 | 50389.9 |
| 30s ribosomal protein s16 | D2923_08735 | Not Available | Positive | 1972093 - 1972341 | 9082.88 |
| ribosome maturation factor rimm | D2923_08740 | Not Available | Positive | 1972369 - 1972923 | 21279.3 |
| trna (guanosine(37)-n1)-methyltransferase trmd | D2923_08745 | Not Available | Positive | 1972951 - 1973694 | 27808.2 |
| 50s ribosomal protein l19 | D2923_08750 | Not Available | Positive | 1973736 - 1974089 | 13245.2 |
| outer membrane-stress sensor serine endopeptidase degs | D2923_08755 | Not Available | Negative | 1974209 - 1975267 | 37545.4 |
| degq family serine endoprotease | D2923_08760 | Not Available | Negative | 1975444 - 1976814 | 48342.2 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





