Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043997 bp
Thymine Count
1047915 bp
Guanine Count
948648 bp
Cytosine Count
934802 bp
Genome Length
3982175 bp
Protein-coding Genes
3542 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | D2923_08340 | Not Available | Positive | 1885347 - 1886252 | 34115.4 |
| duf1097 domain-containing protein | D2923_08345 | Not Available | Positive | 1886414 - 1886926 | 18371.8 |
| duf2813 domain-containing protein | D2923_08350 | Not Available | Negative | 1887159 - 1888823 | 62902.0 |
| bifunctional metallophosphatase/5'-nucleotidase | D2923_08355 | Not Available | Positive | 1889053 - 1890795 | 63873.2 |
| terc/alx family metal homeostasis membrane protein | D2923_08360 | Not Available | Positive | 1891354 - 1892310 | 35944.0 |
| hypothetical protein | D2923_08365 | Not Available | Positive | 1892614 - 1892802 | 7066.63 |
| alkylphosphonate utilization protein | D2923_08370 | Not Available | Negative | 1892952 - 1893527 | 21339.7 |
| site-2 protease family protein | D2923_08375 | Not Available | Positive | 1893711 - 1894793 | 40281.1 |
| hypothetical protein | D2923_08380 | Not Available | Negative | 1894847 - 1895077 | 9247.62 |
| 9-hexadecenoic acid cis-trans isomerase | D2923_08385 | Not Available | Negative | 1895245 - 1897545 | 88739.5 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





