Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043997 bp
Thymine Count
1047915 bp
Guanine Count
948648 bp
Cytosine Count
934802 bp
Genome Length
3982175 bp
Protein-coding Genes
3542 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phasin family protein | D2923_05865 | Not Available | Positive | 1341664 - 1342011 | 13135.7 |
| class i poly(r)-hydroxyalkanoic acid synthase | D2923_05870 | Not Available | Positive | 1342069 - 1343844 | 67559.2 |
| flagellar motor protein motb | D2923_05875 | Not Available | Negative | 1343946 - 1344902 | 35339.9 |
| flagellar motor protein poma | D2923_05880 | Not Available | Negative | 1344914 - 1345678 | 27409.2 |
| exodeoxyribonuclease vii small subunit | D2923_05885 | Not Available | Positive | 1345993 - 1346235 | 8980.49 |
| (2e,6e)-farnesyl diphosphate synthase | D2923_05890 | Not Available | Positive | 1346277 - 1347161 | 32189.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | D2923_05895 | Not Available | Positive | 1347181 - 1349061 | 68331.5 |
| trna pseudouridine(65) synthase truc | D2923_05900 | Not Available | Negative | 1349159 - 1349893 | 28244.2 |
| pseudouridine synthase | D2923_05905 | Not Available | Negative | 1349894 - 1350205 | 11792.3 |
| duf3549 family protein | D2923_05910 | Not Available | Positive | 1350294 - 1351331 | 38743.9 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





