Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043997 bp
Thymine Count
1047915 bp
Guanine Count
948648 bp
Cytosine Count
934802 bp
Genome Length
3982175 bp
Protein-coding Genes
3542 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional nicotinamidase/pyrazinamidase | D2923_05765 | Not Available | Positive | 1311846 - 1312466 | 22296.4 |
| methylglyoxal synthase | D2923_05770 | Not Available | Negative | 1312536 - 1312991 | 16848.4 |
| tmao reductase system periplasmic protein tort | D2923_05775 | Not Available | Negative | 1313046 - 1314095 | 38921.8 |
| tmao reductase system sensor histidine kinase/response regulator tors | D2923_05780 | Not Available | Positive | 1314126 - 1317080 | 109417.0 |
| pyruvate kinase | D2923_05785 | Not Available | Negative | 1317200 - 1318660 | 52180.2 |
| mfs transporter | D2923_05790 | Not Available | Negative | 1318785 - 1320164 | 50067.7 |
| abc transporter substrate-binding protein | D2923_05795 | Not Available | Positive | 1320411 - 1321733 | 49622.1 |
| hamp domain-containing protein | D2923_05800 | Not Available | Positive | 1321730 - 1324099 | 88815.1 |
| sigma-54-dependent fis family transcriptional regulator | D2923_05805 | Not Available | Positive | 1324017 - 1325336 | 50263.5 |
| lysoplasmalogenase | D2923_05810 | Not Available | Negative | 1325333 - 1326013 | 25305.6 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





