Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | NIH41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1140605 bp
Thymine Count
1136194 bp
Guanine Count
999970 bp
Cytosine Count
1014279 bp
Genome Length
4291048 bp
Protein-coding Genes
3931 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ypjd | DN30_1592 | Not Available | Negative | 1595294 - 1596088 | 29222.8 |
| signal recognition particle protein | DN30_1593 | Not Available | Positive | 1596301 - 1597686 | 50361.9 |
| ribosomal protein s16 | DN30_1594 | Not Available | Positive | 1597922 - 1598170 | 9082.88 |
| 16s rrna processing protein rimm | DN30_1595 | Not Available | Positive | 1598222 - 1598752 | 20400.1 |
| trna (guanine(37)-n(1))-methyltransferase | DN30_1596 | Not Available | Positive | 1598780 - 1599523 | 27778.2 |
| ribosomal protein l19 | DN30_1597 | Not Available | Positive | 1599565 - 1599918 | 13245.2 |
| periplasmic serine peptidase degs | DN30_1598 | Not Available | Negative | 1600038 - 1601096 | 37557.4 |
| peptidase do family protein | DN30_1599 | Not Available | Negative | 1601273 - 1602640 | 48211.0 |
| hypothetical protein | DN30_1600 | Not Available | Negative | 1602772 - 1603209 | 16259.5 |
| afg1-like atpase family protein | DN30_1601 | Not Available | Positive | 1603363 - 1604466 | 42467.7 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





