Vibrio cholerae str. VN-2825

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VN-2825 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain exhibits a facultative anaerobic metabolism, allowing it to thrive in both oxygen-rich and oxygen-poor environments. As a heterotroph, V. cholerae str. VN-2825 relies on organic compounds as its energy source, which is indicative of its adaptability to various habitats. The optimal growth temperature for this strain is approximately 20.0°C, suggesting a preference for cooler environments, which may be relevant in understanding its ecological niche. Vibrio cholerae is commonly found in aquatic environments, including brackish waters and estuaries, where it can associate with phytoplankton and other organic materials. This association may play a critical role in the bacterium's survival and proliferation, as it can utilize the organic matter provided by these environments. The ability to exist as a single cell rather than in clusters or chains may also enhance its dispersal capabilities in diverse aquatic habitats, facilitating its colonization and adaptation to varying ecological conditions. Overall, the traits of V. cholerae str. VN-2825 underscore its ecological versatility and highlight its potential interactions within aquatic ecosystems, which could be significant for understanding its role in nutrient cycling and microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainVN-2825

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae str. VN-2825
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Mollusca, Mammalia
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio cholerae strain VN-2825 NODE_99, whole genome shotgun

Gene Summary

Adenine Count

1091937 bp

Thymine Count

1095327 bp

Guanine Count

975965 bp

Cytosine Count

1000002 bp

Genome Length

4163231 bp

Protein-coding Genes

3582 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellum-specific atp synthase fliiBC353_00500Not AvailableNegative106431 - 10775046740.1
flagellar assembly protein flihBC353_00505Not AvailableNegative107754 - 10855429524.4
flagellar motor switch protein fligBC353_00510Not AvailableNegative108647 - 10969338099.8
flagellar m-ring protein flifBC353_00515Not AvailableNegative109686 - 11142863838.9
flagellar hook-basal body complex protein flieBC353_00520Not AvailableNegative111444 - 11175511451.8
sigma-54-dependent fis family transcriptional regulatorBC353_00525Not AvailableNegative111831 - 11326452165.1
pas domain-containing sensor histidine kinaseBC353_00530Not AvailableNegative113267 - 11432238381.2
sigma-54-dependent fis family transcriptional regulatorBC353_00535Not AvailableNegative114433 - 11589954994.3
flagellar export chaperone flisBC353_00540Not AvailableNegative116131 - 11654115016.2
flagellar rod protein flaiBC353_00545Not AvailableNegative116552 - 11685711653.0

Displaying genes 151 – 160 of 3713 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CholeraCausesPMC10103850
Ear infectionsCausesPMC10103850
Wound infectionsCausesPMC10103850
SepticaemiaCausesPMC10103850
Gastrointestinal infectionsCausesPMC10103850
Necrotizing fasciitisCausesPMC10103850
VibriosisCausesPMC10472736
PneumoniaCausesPMC12801787
GastroenteritisCausesPMC12801787
SinusitisCausesPMC12801787

Displaying health effects 1 – 10 of 38 in total