Vibrio cholerae str. VcCHNf5

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VcCHNf5 is a Gram-negative, rod-shaped bacterium characterized by its single-cell arrangement and facultative anaerobic metabolism. This strain exhibits heterotrophic energy acquisition, indicating its reliance on organic compounds for growth. VcCHNf5 thrives optimally at a temperature of 20.0 °C, suggesting a preference for cooler environments, which may be reflective of its ecological niche. The habitat of Vibrio cholerae str. VcCHNf5 is described as multiple, suggesting adaptability to various ecological settings. This adaptability may play a crucial role in its survival and proliferation in diverse environments, potentially including aquatic ecosystems where nutrient availability can fluctuate. The facultative anaerobic nature of this strain allows it to survive in both aerobic and anaerobic conditions, further enhancing its ecological versatility. In summary, the traits of Vibrio cholerae str. VcCHNf5 emphasize its role as a heterotrophic organism that can thrive in cooler environments and adapt to varying oxygen levels. This adaptability may have significant implications for its interactions within microbial communities and its ability to exploit different ecological niches. Understanding these traits can provide insights into the ecological dynamics of Vibrio cholerae and its potential responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainVcCHNf5

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae str. VcCHNf5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Mollusca, Mammalia
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio cholerae strain VcCHNf5 Scaffold100, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3632 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide assembly protein lapbD2926_02255Not AvailableNegative527238 - 52840744555.8
lapa family proteinD2926_02260Not AvailableNegative528419 - 52870010112.8
integration host factor subunit betaD2926_02265Not AvailableNegative528839 - 52911710546.7
30s ribosomal protein s1D2926_02270Not AvailableNegative529406 - 53107661055.4
(d)cmp kinaseD2926_02275Not AvailableNegative531185 - 53186224468.6
comea family dna-binding proteinD2926_02280Not AvailableNegative532045 - 53235610967.4
peptidylprolyl isomeraseD2926_02285Not AvailableNegative532491 - 53435068445.7
dna-binding protein hu-betaD2926_02290Not AvailableNegative534503 - 5347759366.16
endopeptidase laD2926_02295Not AvailableNegative534959 - 53731987992.9
atp-dependent clp protease atp-binding subunit clpxD2926_02300Not AvailableNegative537442 - 53872246492.9

Displaying genes 471 – 480 of 3748 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CholeraCausesPMC10103850
Ear infectionsCausesPMC10103850
Wound infectionsCausesPMC10103850
SepticaemiaCausesPMC10103850
Gastrointestinal infectionsCausesPMC10103850
Necrotizing fasciitisCausesPMC10103850
VibriosisCausesPMC10472736
PneumoniaCausesPMC12801787
GastroenteritisCausesPMC12801787
SinusitisCausesPMC12801787

Displaying health effects 1 – 10 of 38 in total