Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043487 bp
Thymine Count
1040744 bp
Guanine Count
926748 bp
Cytosine Count
950409 bp
Genome Length
3961443 bp
Protein-coding Genes
3564 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock domain-containing protein cspd | D2925_03125 | Not Available | Positive | 715005 - 715235 | 8328.79 |
| nadp-dependent isocitrate dehydrogenase | D2925_03130 | Not Available | Negative | 715334 - 717559 | 80523.1 |
| 23s rrna pseudouridine synthase e | D2925_03135 | Not Available | Positive | 717869 - 718594 | 27020.3 |
| duf3800 domain-containing protein | D2925_03140 | Not Available | Negative | 718795 - 719700 | 35374.7 |
| n-acetyltransferase | D2925_03145 | Not Available | Negative | 719854 - 720336 | 18027.6 |
| hypothetical protein | D2925_03150 | Not Available | Positive | 720240 - 720464 | 8219.91 |
| hypothetical protein | D2925_03155 | Not Available | Positive | 720544 - 722067 | 57930.9 |
| duf1196 domain-containing protein | D2925_03160 | Not Available | Positive | 722181 - 722312 | 5008.44 |
| hypothetical protein | D2925_03175 | Not Available | Positive | 722812 - 722991 | 7022.53 |
| hypothetical protein | D2925_03180 | Not Available | Negative | 722975 - 723244 | 10471.2 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





