Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043487 bp
Thymine Count
1040744 bp
Guanine Count
926748 bp
Cytosine Count
950409 bp
Genome Length
3961443 bp
Protein-coding Genes
3564 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | D2925_02875 | Not Available | Positive | 658583 - 659254 | 23507.0 |
| j domain-containing protein | D2925_02880 | Not Available | Positive | 659319 - 660371 | 40531.9 |
| hypothetical protein | D2925_02885 | Not Available | Positive | 660507 - 660704 | 7666.2 |
| helicase | D2925_02890 | Not Available | Positive | 660996 - 661394 | 14798.8 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | D2925_02895 | Not Available | Positive | 661560 - 662666 | 41633.8 |
| transporter | D2925_02900 | Not Available | Negative | 662868 - 663290 | 15502.5 |
| nad-dependent malic enzyme | D2925_02905 | Not Available | Positive | 663684 - 665372 | 62156.3 |
| duf3392 domain-containing protein | D2925_02910 | Not Available | Positive | 665376 - 665744 | 13546.1 |
| vancomycin high temperature exclusion protein | D2925_02915 | Not Available | Positive | 665717 - 666481 | 28641.2 |
| ggdef domain-containing protein | D2925_02920 | Not Available | Negative | 666582 - 667913 | 50182.2 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





