Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043487 bp
Thymine Count
1040744 bp
Guanine Count
926748 bp
Cytosine Count
950409 bp
Genome Length
3961443 bp
Protein-coding Genes
3564 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimeric intracellular cation channel family protein | D2925_06450 | Not Available | Negative | 1444744 - 1445364 | 22058.0 |
| vitamin b12 abc transporter substrate-binding protein btuf | D2925_06455 | Not Available | Negative | 1445447 - 1446277 | 31059.1 |
| cobalamin biosynthesis family protein | D2925_06460 | Not Available | Negative | 1446278 - 1447231 | 34855.5 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | D2925_06465 | Not Available | Negative | 1447244 - 1447939 | 24526.6 |
| duf1499 domain-containing protein | D2925_06470 | Not Available | Negative | 1448027 - 1448461 | 16275.4 |
| glutamate synthase small subunit | D2925_06475 | Not Available | Negative | 1448648 - 1450060 | 51939.2 |
| glutamate synthase large subunit | D2925_06480 | Not Available | Negative | 1450079 - 1454542 | 163582.0 |
| glutamate synthase subunit beta | D2925_06485 | Not Available | Negative | 1455070 - 1456539 | 53377.9 |
| glutamate synthase large subunit | D2925_06490 | Not Available | Negative | 1456540 - 1461132 | 168940.0 |
| tigr01212 family radical sam protein | D2925_06495 | Not Available | Positive | 1461664 - 1462602 | 34828.8 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





