Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1043487 bp
Thymine Count
1040744 bp
Guanine Count
926748 bp
Cytosine Count
950409 bp
Genome Length
3961443 bp
Protein-coding Genes
3564 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein pspa | D2925_05600 | Not Available | Positive | 1241076 - 1241744 | 25353.2 |
| envelope stress response membrane protein pspb | D2925_05605 | Not Available | Positive | 1241758 - 1241991 | 9154.03 |
| envelope stress response membrane protein pspc | D2925_05610 | Not Available | Positive | 1241957 - 1242373 | 15625.2 |
| efflux rnd transporter periplasmic adaptor subunit | D2925_05615 | Not Available | Positive | 1242562 - 1243593 | 37754.0 |
| efflux rnd transporter periplasmic adaptor subunit | D2925_05620 | Not Available | Positive | 1243565 - 1244674 | 40737.9 |
| efflux rnd transporter permease subunit vexk | D2925_05625 | Not Available | Positive | 1244652 - 1247765 | 114925.0 |
| dna-3-methyladenine glycosylase i | D2925_05630 | Not Available | Positive | 1247852 - 1248433 | 21774.0 |
| cystathionine beta-lyase | D2925_05635 | Not Available | Negative | 1248521 - 1249711 | 43875.6 |
| cardiolipin synthase | D2925_05640 | Not Available | Negative | 1249816 - 1251270 | 55287.6 |
| sodium-dependent transporter | D2925_05645 | Not Available | Positive | 1251825 - 1253171 | 48405.5 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





