Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio alginolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Sparus aurata, Mollusca |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio alginolyticus strain RM-24-2 contig200, whole genome
Gene Summary
Adenine Count
1286997 bp
Thymine Count
1270127 bp
Guanine Count
945754 bp
Cytosine Count
965352 bp
Genome Length
4468230 bp
Protein-coding Genes
3854 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system export apparatus subunit sctt | AL539_RS04440 | Not Available | Positive | 726987 - 727772 | 29024.3 |
| sctu family type iii secretion system export apparatus subunit vscu | AL539_RS04445 | Not Available | Positive | 727788 - 728837 | 38571.7 |
| helix-turn-helix domain-containing protein | AL539_RS04450 | Not Available | Positive | 728940 - 729650 | 26816.5 |
| dmt family transporter | AL539_RS04455 | Not Available | Positive | 729757 - 730659 | 31894.7 |
| hypothetical protein | AL539_RS04460 | Not Available | Negative | 730749 - 732227 | 53191.9 |
| cest family type iii secretion system chaperone | AL539_RS04465 | Not Available | Negative | 732237 - 732695 | 17208.6 |
| type iii secretion system effector vopr | AL539_RS04470 | Not Available | Negative | 732926 - 733903 | 34920.6 |
| type iii secretion system chaperone | AL539_RS04475 | Not Available | Negative | 733914 - 734360 | 16743.0 |
| vops family t3ss effector adenosine monophosphate-protein transferase | AL539_RS04480 | Not Available | Negative | 734616 - 735779 | 41448.8 |
| type iii secretion system chaperone | AL539_RS04485 | Not Available | Negative | 735783 - 736268 | 17967.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Skin and muscle necrosis | Causes | PMC10724927 |
| Vibriosis | Causes | PMC8416912 |
| Gastroenteritis | Causes | PMC8416912 |
| Septicaemia | Causes | PMC8416912 |
| Diseases in farmed shrimp, fish, and molluscs | Causes | PMC12075680 |



