Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio alginolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Sparus aurata, Mollusca |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio alginolyticus strain RM-24-2 contig200, whole genome
Gene Summary
Adenine Count
1286997 bp
Thymine Count
1270127 bp
Guanine Count
945754 bp
Cytosine Count
965352 bp
Genome Length
4468230 bp
Protein-coding Genes
3854 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system protein vscx | AL539_RS04390 | Not Available | Negative | 720024 - 720401 | 14232.1 |
| type iii secretion chaperone sycn | AL539_RS04395 | Not Available | Negative | 720398 - 720772 | 13865.5 |
| tyea family type iii secretion system gatekeeper subunit | AL539_RS04400 | Not Available | Negative | 720759 - 721043 | 10967.8 |
| type iii secretion system gatekeeper subunit sctw | AL539_RS04405 | Not Available | Negative | 721024 - 721917 | 33455.4 |
| sctn family type iii secretion system atpase vscn | AL539_RS04410 | Not Available | Positive | 722103 - 723425 | 47875.8 |
| type iii secretion protein | AL539_RS04415 | Not Available | Positive | 723422 - 723883 | 18387.9 |
| type iii secretion system needle length determinant | AL539_RS04420 | Not Available | Positive | 723893 - 725098 | 44615.2 |
| sctq family type iii secretion system cytoplasmic ring protein vscq | AL539_RS04425 | Not Available | Positive | 725095 - 726063 | 35582.6 |
| sctr family type iii secretion system export apparatus subunit vscr | AL539_RS04430 | Not Available | Positive | 726060 - 726710 | 24175.4 |
| scts family type iii secretion system export apparatus subunit vscs | AL539_RS04435 | Not Available | Positive | 726724 - 726990 | 9595.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Skin and muscle necrosis | Causes | PMC10724927 |
| Vibriosis | Causes | PMC8416912 |
| Gastroenteritis | Causes | PMC8416912 |
| Septicaemia | Causes | PMC8416912 |
| Diseases in farmed shrimp, fish, and molluscs | Causes | PMC12075680 |



