Photobacterium angustum str. LC1-200

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium angustum str. LC1-200 is a Gram-negative, aerobic bacterium isolated from the surface coastal waters of Botany Bay, a marine environment located in Sydney, Australia. This microbe thrives in the unique ecological niche provided by the coastal waters, reflecting its adaptation to the marine habitat. As an aerobic organism, Photobacterium angustum str. LC1-200 requires oxygen for its metabolic processes, which suggests that it plays a role in the oxygen-rich surface layers of the water column. Its presence in Botany Bay indicates its potential involvement in biogeochemical cycles, particularly in processes related to nutrient cycling and organic matter decomposition in coastal marine ecosystems. The isolation of this strain from a specific geographic locale underscores the importance of local environmental conditions in shaping microbial communities. The adaptability of Photobacterium angustum str. LC1-200 to the dynamic conditions of a coastal ecosystem may provide insights into the resilience and functional diversity of marine bacteria in response to environmental changes. This adaptability highlights the significance of studying local microbial populations to understand their roles in coastal ecology and potential responses to anthropogenic influences.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium angustum
StrainLC1-200

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBotany Bay; Marine; sea; surface coastal waters; surface coastal waters in Botany Bay (Sydney), Australia
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium angustum strain LC1-200 plasmid p1 LC1_200_plasmid,

Gene Summary

Adenine Count

1473779 bp

Thymine Count

1468006 bp

Guanine Count

960807 bp

Cytosine Count

983389 bp

Genome Length

4885981 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysogenization regulator hfldBTO08_02955Not AvailableNegative694165 - 69478222980.9
trna 2-thiouridine(34) synthase mnmaBTO08_02960Not AvailableNegative694795 - 69591041726.5
23s rrna pseudouridylate synthaseBTO08_02965Not AvailableNegative696273 - 69692324571.7
nadp-dependent isocitrate dehydrogenaseBTO08_02970Not AvailablePositive697064 - 69831745630.8
cold shock domain protein cspdBTO08_02975Not AvailableNegative698786 - 6990078076.37
atp-dependent clp protease adapter clpsBTO08_02980Not AvailablePositive699232 - 69955212210.8
atp-dependent clp protease atp-binding subunit clpaBTO08_02985Not AvailablePositive699600 - 70186784074.7
translation initiation factor if-1BTO08_02990Not AvailableNegative702009 - 7022278162.07
arginyltransferaseBTO08_02995Not AvailableNegative702428 - 70311726535.8
leucyl/phenylalanyl-trna--protein transferaseBTO08_03000Not AvailableNegative703121 - 70383426884.3

Displaying genes 591 – 600 of 4400 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.