Photobacterium angustum str. LC1-200

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium angustum str. LC1-200 is a Gram-negative, aerobic bacterium isolated from the surface coastal waters of Botany Bay, a marine environment located in Sydney, Australia. This microbe thrives in the unique ecological niche provided by the coastal waters, reflecting its adaptation to the marine habitat. As an aerobic organism, Photobacterium angustum str. LC1-200 requires oxygen for its metabolic processes, which suggests that it plays a role in the oxygen-rich surface layers of the water column. Its presence in Botany Bay indicates its potential involvement in biogeochemical cycles, particularly in processes related to nutrient cycling and organic matter decomposition in coastal marine ecosystems. The isolation of this strain from a specific geographic locale underscores the importance of local environmental conditions in shaping microbial communities. The adaptability of Photobacterium angustum str. LC1-200 to the dynamic conditions of a coastal ecosystem may provide insights into the resilience and functional diversity of marine bacteria in response to environmental changes. This adaptability highlights the significance of studying local microbial populations to understand their roles in coastal ecology and potential responses to anthropogenic influences.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium angustum
StrainLC1-200

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBotany Bay; Marine; sea; surface coastal waters; surface coastal waters in Botany Bay (Sydney), Australia
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium angustum strain LC1-200 plasmid p1 LC1_200_plasmid,

Gene Summary

Adenine Count

1473779 bp

Thymine Count

1468006 bp

Guanine Count

960807 bp

Cytosine Count

983389 bp

Genome Length

4885981 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBTO08_18650Not AvailableNegative4080692 - 408106613740.4
phosphate abc transporter substrate-binding proteinBTO08_18655Not AvailableNegative4081484 - 408230828855.5
hypothetical proteinBTO08_18660Not AvailableNegative4082438 - 408286016333.3
caax protease family proteinBTO08_18665Not AvailablePositive4083034 - 408385830152.1
hypothetical proteinBTO08_18670Not AvailableNegative4083913 - 408504643172.3
cytochrome c554BTO08_18675Not AvailableNegative4085202 - 408552211828.1
branched-chain alpha-keto acid dehydrogenase subunit e2BTO08_18680Not AvailableNegative4085650 - 408685243723.1
alpha-ketoacid dehydrogenase subunit betaBTO08_18685Not AvailableNegative4086849 - 408783235919.8
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaBTO08_18690Not AvailableNegative4087825 - 408893441247.1
dna ligaseBTO08_18695Not AvailableNegative4089171 - 409011535900.2

Displaying genes 3671 – 3680 of 4400 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.