Photobacterium angustum str. LC1-200

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium angustum str. LC1-200 is a Gram-negative, aerobic bacterium isolated from the surface coastal waters of Botany Bay, a marine environment located in Sydney, Australia. This microbe thrives in the unique ecological niche provided by the coastal waters, reflecting its adaptation to the marine habitat. As an aerobic organism, Photobacterium angustum str. LC1-200 requires oxygen for its metabolic processes, which suggests that it plays a role in the oxygen-rich surface layers of the water column. Its presence in Botany Bay indicates its potential involvement in biogeochemical cycles, particularly in processes related to nutrient cycling and organic matter decomposition in coastal marine ecosystems. The isolation of this strain from a specific geographic locale underscores the importance of local environmental conditions in shaping microbial communities. The adaptability of Photobacterium angustum str. LC1-200 to the dynamic conditions of a coastal ecosystem may provide insights into the resilience and functional diversity of marine bacteria in response to environmental changes. This adaptability highlights the significance of studying local microbial populations to understand their roles in coastal ecology and potential responses to anthropogenic influences.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium angustum
StrainLC1-200

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBotany Bay; Marine; sea; surface coastal waters; surface coastal waters in Botany Bay (Sydney), Australia
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium angustum strain LC1-200 plasmid p1 LC1_200_plasmid,

Gene Summary

Adenine Count

1473779 bp

Thymine Count

1468006 bp

Guanine Count

960807 bp

Cytosine Count

983389 bp

Genome Length

4885981 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinyldiaminopimelate aminotransferaseBTO08_12250Not AvailableNegative2673121 - 267390929372.5
succinylglutamate-semialdehyde dehydrogenaseBTO08_12255Not AvailableNegative2673954 - 267541151882.8
arginine n-succinyltransferaseBTO08_12260Not AvailableNegative2675441 - 267645738024.2
aspartate aminotransferase family proteinBTO08_12265Not AvailableNegative2676573 - 267779344073.8
anthranilate/aminodeoxychorismate synthase component iiBTO08_12270Not AvailableNegative2678122 - 267869721165.4
tryptophan--trna ligaseBTO08_12275Not AvailableNegative2678812 - 267983437534.9
phosphoglycolate phosphataseBTO08_12280Not AvailableNegative2679926 - 268061225017.8
ribulose-phosphate 3-epimeraseBTO08_12285Not AvailableNegative2680612 - 268128624486.8
ribulose phosphate epimeraseBTO08_12290Not AvailablePositive2681466 - 26816727395.24
dna adenine methylaseBTO08_12295Not AvailableNegative2681673 - 268253032476.3

Displaying genes 2411 – 2420 of 4400 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.