Photobacterium angustum str. LC1-200

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium angustum str. LC1-200 is a Gram-negative, aerobic bacterium isolated from the surface coastal waters of Botany Bay, a marine environment located in Sydney, Australia. This microbe thrives in the unique ecological niche provided by the coastal waters, reflecting its adaptation to the marine habitat. As an aerobic organism, Photobacterium angustum str. LC1-200 requires oxygen for its metabolic processes, which suggests that it plays a role in the oxygen-rich surface layers of the water column. Its presence in Botany Bay indicates its potential involvement in biogeochemical cycles, particularly in processes related to nutrient cycling and organic matter decomposition in coastal marine ecosystems. The isolation of this strain from a specific geographic locale underscores the importance of local environmental conditions in shaping microbial communities. The adaptability of Photobacterium angustum str. LC1-200 to the dynamic conditions of a coastal ecosystem may provide insights into the resilience and functional diversity of marine bacteria in response to environmental changes. This adaptability highlights the significance of studying local microbial populations to understand their roles in coastal ecology and potential responses to anthropogenic influences.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium angustum
StrainLC1-200

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBotany Bay; Marine; sea; surface coastal waters; surface coastal waters in Botany Bay (Sydney), Australia
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium angustum strain LC1-200 plasmid p1 LC1_200_plasmid,

Gene Summary

Adenine Count

1473779 bp

Thymine Count

1468006 bp

Guanine Count

960807 bp

Cytosine Count

983389 bp

Genome Length

4885981 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydrolipoyl dehydrogenaseBTO08_11250Not AvailableNegative2474706 - 247613650810.7
pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferaseBTO08_11255Not AvailableNegative2476332 - 247821265067.7
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeBTO08_11260Not AvailableNegative2478227 - 248089399138.8
transcriptional regulator pdhrBTO08_11265Not AvailableNegative2480966 - 248174229661.6
n-acetylmuramoyl-l-alanine amidaseBTO08_11270Not AvailableNegative2482073 - 248261820926.9
nicotinate-nucleotide diphosphorylaseBTO08_11275Not AvailablePositive2482869 - 248375632153.6
hypothetical proteinBTO08_11280Not AvailablePositive2484076 - 248446813350.9
type iv-a pilus assembly atpase pilbBTO08_11285Not AvailablePositive2484474 - 248615961977.0
type ii secretion system protein fBTO08_11290Not AvailablePositive2486203 - 248742644911.4
prepilin peptidaseBTO08_11295Not AvailablePositive2487544 - 248841332261.3

Displaying genes 2211 – 2220 of 4400 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.