Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit alpha | EPS31_04450 | Not Available | Positive | 945949 - 949431 | 129901.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | EPS31_04455 | Not Available | Positive | 949444 - 950403 | 35273.6 |
| lysine decarboxylase ldcc | EPS31_04460 | Not Available | Positive | 950501 - 952642 | 80594.9 |
| voc family protein | EPS31_04465 | Not Available | Positive | 952699 - 953088 | 14707.4 |
| trna lysidine(34) synthetase tils | EPS31_04470 | Not Available | Positive | 953153 - 954451 | 48247.2 |
| rho-binding antiterminator | EPS31_04475 | Not Available | Negative | 954500 - 954760 | 9640.41 |
| yaep family protein | EPS31_04480 | Not Available | Negative | 954747 - 954947 | 7214.59 |
| yaeq family protein | EPS31_04485 | Not Available | Positive | 955113 - 955658 | 20919.8 |
| aminoacyl-trna hydrolase | EPS31_04490 | Not Available | Positive | 955655 - 956077 | 15604.9 |
| envelope stress response activation lipoprotein nlpe | EPS31_04495 | Not Available | Positive | 956091 - 956801 | 25931.8 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






