Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | EPS31_04400 | Not Available | Positive | 935729 - 936487 | 28314.5 |
| phosphatidate cytidylyltransferase | EPS31_04405 | Not Available | Positive | 936500 - 937357 | 31429.5 |
| sigma e protease regulator rsep | EPS31_04410 | Not Available | Positive | 937369 - 938721 | 49122.2 |
| outer membrane protein assembly factor bama | EPS31_04415 | Not Available | Positive | 938751 - 941183 | 90557.5 |
| molecular chaperone skp | EPS31_04420 | Not Available | Positive | 941305 - 941790 | 17689.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | EPS31_04425 | Not Available | Positive | 941794 - 942819 | 36054.7 |
| 3-hydroxyacyl-acp dehydratase fabz | EPS31_04430 | Not Available | Positive | 942924 - 943379 | 17034.0 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | EPS31_04435 | Not Available | Positive | 943383 - 944171 | 28081.7 |
| lipid-a-disaccharide synthase | EPS31_04440 | Not Available | Positive | 944171 - 945319 | 42434.0 |
| ribonuclease hii | EPS31_04445 | Not Available | Positive | 945316 - 945912 | 21511.2 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






