Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe(3+)-hydroxamate abc transporter permease fhub | EPS31_04300 | Not Available | Positive | 913158 - 915140 | 70382.5 |
| glutamate-1-semialdehyde 2,1-aminomutase | EPS31_04305 | Not Available | Negative | 915175 - 916455 | 45372.7 |
| h(+)/cl(-) exchange transporter clca | EPS31_04310 | Not Available | Positive | 916680 - 918101 | 50380.0 |
| hypothetical protein | EPS31_04315 | Not Available | Positive | 918125 - 918190 | 2329.94 |
| iron-sulfur cluster insertion protein erpa | EPS31_04320 | Not Available | Positive | 918183 - 918527 | 12101.2 |
| tric cation channel family protein | EPS31_04325 | Not Available | Negative | 918574 - 919197 | 22129.1 |
| vitamin b12 abc transporter substrate-binding protein btuf | EPS31_04330 | Not Available | Negative | 919235 - 920035 | 29352.4 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | EPS31_04335 | Not Available | Negative | 920028 - 920726 | 24355.4 |
| dgtpase | EPS31_04340 | Not Available | Positive | 920810 - 922327 | 59335.1 |
| serine endoprotease degp | EPS31_04345 | Not Available | Positive | 922457 - 923881 | 49357.3 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






