Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EPS31_04190 | Not Available | Positive | 886119 - 887420 | 47751.2 |
| glycoside hydrolase family 31 protein | EPS31_04195 | Not Available | Positive | 887435 - 889816 | 92040.3 |
| choline transporter | EPS31_04210 | Not Available | Negative | 891541 - 891699 | 6088.06 |
| bcct family transporter | EPS31_04215 | Not Available | Negative | 891644 - 893641 | 73688.5 |
| is1 family transposase | EPS31_04220 | Not Available | Positive | 893901 - 894083 | 7202.85 |
| fimbrial protein | EPS31_04225 | Not Available | Negative | 894146 - 894706 | 20108.2 |
| outer membrane usher protein | EPS31_04230 | Not Available | Negative | 894725 - 897325 | 95449.7 |
| fimbrial chaperone | EPS31_04235 | Not Available | Negative | 897360 - 898094 | 26340.6 |
| fimbrial protein | EPS31_04240 | Not Available | Negative | 898184 - 898756 | 19609.1 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | EPS31_04245 | Not Available | Negative | 899105 - 899584 | 17917.7 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






