Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase domain-containing protein | EPS31_04115 | Not Available | Positive | 873179 - 873291 | 4167.0 |
| duf4198 domain-containing protein | EPS31_04120 | Not Available | Negative | 873354 - 874145 | 29515.9 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | EPS31_04125 | Not Available | Negative | 874152 - 876122 | 72070.9 |
| transcriptional regulator | EPS31_04135 | Not Available | Positive | 877365 - 877637 | 10553.7 |
| hypothetical protein | EPS31_04145 | Not Available | Negative | 878484 - 879653 | 44727.0 |
| serine/threonine protein kinase | EPS31_04150 | Not Available | Positive | 880020 - 880208 | 7112.43 |
| site-specific recombinase | EPS31_04155 | Not Available | Positive | 880329 - 881069 | 28165.5 |
| repb family plasmid replication initiator protein | EPS31_04160 | Not Available | Negative | 881354 - 882331 | 37286.0 |
| is1 family transposase | EPS31_04180 | Not Available | Positive | 884523 - 884668 | 5226.15 |
| laci family transcriptional regulator | EPS31_04185 | Not Available | Negative | 884787 - 885857 | 40039.8 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






