Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EPS31_04005 | Not Available | Negative | 854315 - 855319 | 37559.7 |
| dipeptide abc transporter atp-binding protein | EPS31_04010 | Not Available | Negative | 855316 - 856299 | 35862.5 |
| peptide abc transporter permease | EPS31_04015 | Not Available | Negative | 856310 - 857212 | 32310.5 |
| peptide abc transporter permease | EPS31_04020 | Not Available | Negative | 857222 - 858241 | 37499.4 |
| hypothetical protein | EPS31_04025 | Not Available | Positive | 858204 - 858419 | 7729.3 |
| abc transporter substrate-binding protein | EPS31_04030 | Not Available | Negative | 858392 - 859999 | 60280.8 |
| Trna-pro | Not Available | Not Available | Positive | 860964 - 861040 | Not Available |
| kdo(2)-lipid a phosphoethanolamine 7''-transferase | EPS31_04050 | Not Available | Negative | 861132 - 862823 | 63865.0 |
| oxalate/formate antiport family mfs transporter | EPS31_04055 | Not Available | Negative | 863147 - 864355 | 42939.4 |
| autotransporter outer membrane beta-barrel domain-containing protein | EPS31_04060 | Not Available | Negative | 864584 - 865282 | 25932.0 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






