Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail component | EPS31_10950 | Not Available | Negative | 2224522 - 2225154 | 22204.9 |
| Tail fiber component | EPS31_10955 | Not Available | Negative | 2225100 - 2225843 | 28209.4 |
| Phage minor tail protein l | EPS31_10960 | Not Available | Negative | 2225849 - 2226547 | 25834.4 |
| Putative minor tail protein | EPS31_10965 | Not Available | Negative | 2226547 - 2226876 | 12615.2 |
| Putative tail length tape measure protein precursor | EPS31_10970 | Not Available | Negative | 2226873 - 2227601 | 25447.1 |
| Hypothetical protein | EPS31_12750 | Not Available | Positive | 2579002 - 2579880 | 34220.7 |
| hypothetical protein | EPS31_12755 | Not Available | Positive | 2580425 - 2580838 | 15348.2 |
| hypothetical | EPS31_12760 | Not Available | Negative | 2581039 - 2581178 | 5017.22 |
| Hypothetical protein | EPS31_12765 | Not Available | Negative | 2581175 - 2581468 | 10965.5 |
| Tail fiber protein | EPS31_12770 | Not Available | Negative | 2581511 - 2582551 | 38040.4 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






