Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yhjd | EPS31_03900 | Not Available | Positive | 825351 - 826364 | 37961.6 |
| mfs transporter | EPS31_03905 | Not Available | Positive | 826756 - 828078 | 47210.9 |
| asma family protein | EPS31_03910 | Not Available | Negative | 828260 - 830320 | 74418.8 |
| cyclic-guanylate-specific phosphodiesterase | EPS31_03915 | Not Available | Negative | 830390 - 831157 | 29592.9 |
| 2-dehydro-3-deoxygluconokinase | EPS31_03920 | Not Available | Positive | 831389 - 832318 | 33963.2 |
| insulinase family protein | EPS31_03925 | Not Available | Negative | 832414 - 833910 | 55519.4 |
| dicarboxylate/amino acid:cation symporter | EPS31_03930 | Not Available | Negative | 834130 - 835416 | 45439.2 |
| biofilm formation regulator hmsp | EPS31_03935 | Not Available | Negative | 835599 - 837587 | 74470.8 |
| cellulose biosynthesis protein bcsc | EPS31_03940 | Not Available | Negative | 837669 - 841142 | 127830.0 |
| cellulase | EPS31_03945 | Not Available | Negative | 841124 - 842230 | 41762.5 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






