Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1198 domain-containing protein | EPS31_03745 | Not Available | Positive | 795902 - 796354 | 17220.1 |
| dna-binding transcriptional regulator | EPS31_03750 | Not Available | Negative | 796470 - 796793 | 11639.2 |
| type ii toxin-antitoxin system rele/pare family toxin | EPS31_03755 | Not Available | Negative | 796777 - 797130 | 13482.2 |
| purine ribonucleoside efflux pump nepi | EPS31_03765 | Not Available | Positive | 797363 - 798547 | 41657.3 |
| inverse autotransporter adhesin eaex/air | EPS31_03770 | Not Available | Positive | 798748 - 803727 | 175359.0 |
| glutamate decarboxylase | EPS31_03875 | Not Available | Negative | 819206 - 819567 | 13841.3 |
| cytochrome c peroxidase | EPS31_03880 | Not Available | Negative | 819778 - 821175 | 51529.2 |
| alpha,alpha-trehalase tref | EPS31_03885 | Not Available | Positive | 821580 - 823229 | 63700.1 |
| response regulator transcription factor | EPS31_03890 | Not Available | Negative | 823280 - 823882 | 22605.6 |
| lysr family transcriptional regulator | EPS31_03895 | Not Available | Positive | 824403 - 825302 | 33327.5 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






