Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | EPS31_03590 | Not Available | Positive | 763473 - 763609 | 5374.49 |
| mfs transporter | EPS31_03595 | Not Available | Positive | 763610 - 763858 | 8277.33 |
| colicin m resistance protein | EPS31_03600 | Not Available | Negative | 763855 - 764919 | 40088.4 |
| duf3748 domain-containing protein | EPS31_03605 | Not Available | Positive | 764987 - 766234 | 46139.1 |
| ycek/yidq family lipoprotein | EPS31_03610 | Not Available | Negative | 766236 - 766568 | 11826.3 |
| heat shock chaperone ibpa | EPS31_03615 | Not Available | Positive | 766874 - 767287 | 15774.6 |
| heat shock chaperone ibpb | EPS31_03620 | Not Available | Positive | 767399 - 767827 | 16094.1 |
| putative transporter | EPS31_03625 | Not Available | Positive | 768023 - 769684 | 58970.9 |
| gntr family transcriptional regulator | EPS31_03630 | Not Available | Negative | 769681 - 770397 | 27356.5 |
| pts sugar transporter subunit iib | EPS31_03635 | Not Available | Positive | 770693 - 772309 | 58349.2 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






