Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf932 domain-containing protein | EPS31_03535 | Not Available | Positive | 756021 - 756289 | 10785.0 |
| aspartate ammonia-lyase | EPS31_03540 | Not Available | Negative | 756290 - 756492 | 7578.03 |
| peptidase t | EPS31_03545 | Not Available | Positive | 757358 - 758614 | 45837.3 |
| c4-dicarboxylate abc transporter | EPS31_03550 | Not Available | Positive | 758611 - 759972 | 47902.6 |
| virulence protein | EPS31_03555 | Not Available | Negative | 760025 - 760252 | 8094.82 |
| gtpase family protein | EPS31_03560 | Not Available | Negative | 760299 - 760394 | 3679.34 |
| hypothetical protein | EPS31_03565 | Not Available | Negative | 760394 - 761545 | 43878.7 |
| hypothetical protein | EPS31_03570 | Not Available | Negative | 761940 - 762170 | 8907.73 |
| hypothetical protein | EPS31_03575 | Not Available | Positive | 762178 - 762522 | 12610.0 |
| hypothetical protein | EPS31_03585 | Not Available | Negative | 763251 - 763439 | 6941.23 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






