Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei strain B7414 GCID_CREK_0085_NODE_157.ctg_1, whole
Gene Summary
Adenine Count
1301421 bp
Thymine Count
1305416 bp
Guanine Count
1346729 bp
Cytosine Count
1321909 bp
Genome Length
5290188 bp
Protein-coding Genes
4871 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulation protein nr(i) | EPS31_03430 | Not Available | Positive | 735202 - 736611 | 52257.9 |
| hypothetical protein | EPS31_03435 | Not Available | Positive | 736723 - 736833 | 3618.45 |
| oxygen-independent coproporphyrinogen iii oxidase | EPS31_03440 | Not Available | Negative | 737023 - 738396 | 52698.0 |
| der gtpase-activating protein yihi | EPS31_03445 | Not Available | Negative | 738585 - 739094 | 19060.3 |
| yiha family ribosome biogenesis gtp-binding protein | EPS31_03450 | Not Available | Positive | 739676 - 740308 | 23562.2 |
| dna polymerase i | EPS31_03455 | Not Available | Negative | 740690 - 743476 | 103124.0 |
| hypothetical protein | EPS31_03460 | Not Available | Positive | 743478 - 743720 | 9397.5 |
| acyltransferase | EPS31_03465 | Not Available | Positive | 743840 - 744772 | 36310.1 |
| duf945 family protein | EPS31_03470 | Not Available | Negative | 744813 - 746243 | 52714.9 |
| thiol:disulfide interchange protein dsba | EPS31_03475 | Not Available | Negative | 746398 - 747024 | 23105.8 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






